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Contents

Chapter 1 
» Junior Independent Study
» Senior Independent Study

» Off Campus Study

» Criteria for Evaluating Independent Study in Biology

Chapter 2
» Format for Thesis
» Mechanics of Thesis
» Some Rules for Thesis Preparation
» The Biological Literature
» Citations and Bibliographic Format

Chapter 3
» Personnel Responsibilities
» Safety Procedures Sheet
» Emergencies
» Chemical Stockroom
» Special Facilities
» Ordering Chemicals

» Syringe and Needle Policy

» Building Procedures

» Carrel Sign Up and Keys
» Copier Account

 

Junior Independent Study in Biology

401. INDEPENDENT STUDY An introduction to the techniques and practices of biological research focusing specifically on the design of experiments, data analysis and reduction, and information retrieval systems. Exploration of the literature related to the proposed I.S. thesis and the design of the research upon which the thesis will be based will be incorporated into a term paper. Two 90-minute classroom meetings weekly. Offered only in the Spring.

-- The College of Wooster Catalogue

Junior Independent Study is designed to help Biology majors develop a variety of skills that are fundamental in planning and carrying out an independent scientific research project, as well as in communicating research findings to one's intellectual community.

Course Organization

Biology 401 is partitioned, for administrative and scheduling purposes, into two parts. In the Tuesday class sessions, students prepare the Junior independent study paper in consultation with a faculty advisor (see below). Each student gains experience in reading and analyzing scientific papers, in writing clearly and concisely, and in framing testable experimental questions appropriate for a research project.

In the Thursday class sessions, students conduct a concentrated study of basic biostatistics. Lectures and class exercises cover descriptive statistics, hypothesis testing, and parametric and non-parametric statistical procedures for data analysis, as well as principles of experimental design. Students prepare problem sets to practice statistical procedures. The biostatistics portion of the course concludes with appropriate examinations to test comprehension.

In addition, students enrolled in Biology 401 are required to attend weekly departmental seminars.

Independent Study Research Projects

The assignment of an Independent Study research project is a two-step process: First, you will identify three research projects that are of interest to you; then assignments will be made by the Department after examining everyone's preferences.

Possible Research Projects: After enrolling in Biology 401 Independent Study, you will be given a list of research research projects available in the Biology Department. In addition to projects on this list, you can also propose a project of your own design or to work with an investigator off-campus, such as at the OARDC. In such cases, you must also make arrangements for a Biology professor to serve as your I.S. advisor.

Assignments: Once all Biology 401 students have submitted their list of preferred research projects, the Biology Department will make I.S. project assignments. The intent is that each student will be assigned a project of interest, while evenly distributing I.S. assignments among Biology faculty.

Preparation of the Junior Independent Study Paper

Once you have been assigned a project, you will meet with the faculty advisor of that project weekly to prepare your Biology 401 Independent Study paper. This person will also serve as your academic advisor. In general, this person will continue to advise your Senior IS thesis, unless that faculty member is going on sabbatical leave or there are other extenuating circumstances that suggest a change in advisor is appropriate.

The Biology 401 paper consists of two-parts: (i) a literature survey and (ii) a proposal for the independent study research to be conducted in the senior year.

Part I, Literature Review

In Part I of the junior independent study paper, the student is expected to include a thorough review of the existing literature on the topic being proposed. To achieve this objective, the student must conduct an extensive electronic bibliographic search, the results of which should be submitted to your advisor by the assigned date (typically the end of the sixth week of classes). You should begin your literature review and library research as soon as possible, since it may take 4-6 weeks to obtain materials from interlibrary loan (ILL). Based on this bibliographic search, the student should then use abstracts, review articles, and primary research articles to (i) identify and summarize previous studies relevant to the topic, (ii) explore the theoretical background of the question, and (iii) identify directions for future research efforts. Part I of the junior independent study paper is due on the date assigned by your advisor (typically the first day following Spring Break).

 

Part II, Research Proposal

In Part II of the junior independent study paper, the student prepares a research proposal, which should include (i) a statement of the problem being investigated, (ii) a concise discussion of the questions being asked in the student's research plan, and (iii) a description of the methods and materials needed to carry out the project. The format of the research proposal generally should follow the guidelines described in Pechenik's A Short Guide to Writing about Biology (see the chapter on "Writing Research Proposals"), but may vary depending on the requirements of individual faculty advisors. Part II of the junior independent study paper is due on the date assigned by your advisor (typically the last day of classes).

Ask your advisor what she or he would like you to cover in your Junior I.S. paper. Different faculty members have different expectations. Some want a general introduction to the topic at large. Some want a timetable. Some want a list of equipment. Don't depend on what your friend did last year for her advisor, who might be different from yours. Faculty members also differ in whether or not they will review rough drafts of the junior paper before you turn it in, and in how they choose to schedule meetings with you during the semester.

Summer Research Projects
If you plan to collect data on your I.S. project in the summer, you need to decide on a topic and to make substantial progress on the literature research as early in the semester as possible. Be sure that the work you will do is appropriate for an I.S. project, especially if it is being done as a laboratory or field assistant for someone else in their own ongoing project. If you use your knowledge of statistics to develop protocols and to design your variables with final statistical analysis in mind, the tools you acquire during your junior independent study training will serve you well.
Evaluation of Junior Independent Study
Your junior independent study advisor will assign you a letter grade based on your bibliographic search, parts I and II of your junior I.S. paper, and attendance at the weekly departmental seminars. Together, these will constitute 50% of your final grade in Biology 401. You will also receive a letter grade for the statistics portion of the course, which will also constitute 50% of your final grade in Biology 401. However, the department feels that a passing grade in the statistics portion of the course is essential for a Biology major graduating from this department. A failing grade in the statistics portion of the course will mean that you must take remedial steps to master this material in some other format, even if that failing grade does not result in a D or an F in Biology 401 overall.

 

 

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